SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164500179
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr19:49637545-49648869
Size: 11324
Super-enhancer rank 179
Number of SE elements: 4
ChIP density(Case|Control): 43278.0632|960.2752
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SCAF1 ;
ROSE Overlap RRAS ; SCAF1 ;
ROSE Proximal IRF3 ; CPT1C ; MIR5088 ; BCL2L12 ; PRR12 ; PRMT1 ; ADM5 ;
ROSE Closest SCAF1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500179 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers