SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164500066
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr4:11605066-11653164
Size: 48098
Super-enhancer rank 66
Number of SE elements: 6
ChIP density(Case|Control): 74979.9722|5516.8406
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HS3ST1 ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest HS3ST1 ;
Lasso ;
PreSTIGE ;
ABC HS3ST1 ; ZNF518B ; NKX3-2 ; LINC01096 ; BOD1L1 ; RAB28 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500066 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers