SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164400762
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR1 Nutlin3a 10h
Genomic region: chr1:11923626-11973191
Size: 49565
Super-enhancer rank 762
Number of SE elements: 10
ChIP density(Case|Control): 22834.5955|3667.81
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLOD1 ;
ROSE Overlap PLOD1 ; KIAA2013 ;
ROSE Proximal MFN2 ; RNU5E-1 ; MIIP ;
ROSE Closest PLOD1 ;
Lasso ;
PreSTIGE ;
ABC PLOD1 ; MFN2 ; MIIP ; VPS13D ; APITD1-CORT ; CENPS ; CASZ1 ; TARDBP ; SRM ; LOC105376736 ; EXOSC10 ; ANGPTL7 ; MTOR ; UBIAD1 ; DISP3 ; FBXO2 ; FBXO44 ; FBXO6 ; MAD2L2 ; DRAXIN ; AGTRAP ; C1orf167 ; CLCN6 ; MTHFR ; KIAA2013 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164400762 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers