SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164400239
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR1 Nutlin3a 10h
Genomic region: chr17:8149956-8160192
Size: 10236
Super-enhancer rank 239
Number of SE elements: 1
ChIP density(Case|Control): 36138.198|1167.9276
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PER1 ;
ROSE Overlap PER1 ; VAMP2 ;
ROSE Proximal MIR4521 ; HES7 ; ALOXE3 ; BORCS6 ; SNORD118 ; MIR6883 ; TMEM107 ;
ROSE Closest PER1 ;
Lasso ;
PreSTIGE ;
ABC PFAS ; CTC1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164400239 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers