SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164400174
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR1 Nutlin3a 10h
Genomic region: chr17:18252493-18273440
Size: 20947
Super-enhancer rank 174
Number of SE elements: 4
ChIP density(Case|Control): 42101.3753|1604.5402
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIEF2 ;
ROSE Overlap FLII ; MIEF2 ;
ROSE Proximal LLGL1 ; SMCR8 ; TOP3A ;
ROSE Closest MIEF2 ;
Lasso ;
PreSTIGE ;
ABC SHMT1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164400174 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers