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Super-enhancer overview

SE ID: SE_02_164400148
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR1 Nutlin3a 10h
Genomic region: chr19:18354525-18391392
Size: 36867
Super-enhancer rank 148
Number of SE elements: 8
ChIP density(Case|Control): 46677.3087|3251.6694
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GDF15 ;
ROSE Overlap LRRC25 ; PGPEP1 ; MIR3189 ; GDF15 ;
ROSE Proximal ISYNA1 ; LSM4 ; SSBP4 ;
ROSE Closest GDF15 ;
Lasso ;
PreSTIGE ;
ABC LOC729966 ; JUND ; KIAA1683 ; LSM4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164400148 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers