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Super-enhancer overview

SE ID: SE_02_164300177
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut1h_BR2 Nutlin3a 1h
Genomic region: chr12:6523996-6566786
Size: 42790
Super-enhancer rank 177
Number of SE elements: 5
ChIP density(Case|Control): 46833.655|6011.995
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GAPDH ;
ROSE Overlap NCAPD2 ; GAPDH ; NOP2 ; IFFO1 ;
ROSE Proximal CHD4 ; GAPDH ; MRPL51 ; SCARNA11 ; NOP2 ; SCARNA10 ;
ROSE Closest GAPDH ;
Lasso ;
PreSTIGE ;
ABC TAPBPL ; VAMP1 ; MRPL51 ; NCAPD2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164300177 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers