SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164200302
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut1h_BR1 Nutlin3a 1h
Genomic region: chr5:181159541-181219026
Size: 59485
Super-enhancer rank 302
Number of SE elements: 10
ChIP density(Case|Control): 43531.123|7483.213
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC102577426 ;
ROSE Overlap TRIM7 ; LOC102577426 ;
ROSE Proximal SNORD95 ; SNORD96A ; TRIM41 ; OR2V2 ; OR2V1 ; TRIM7 ; MIR4638 ; TRIM52-AS1 ; CTC-338M12.4 ; GNB2L1 ; TRIM52 ;
ROSE Closest LOC102577426 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164200302 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers