SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164200051
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut1h_BR1 Nutlin3a 1h
Genomic region: chr12:124904441-124952986
Size: 48545
Super-enhancer rank 51
Number of SE elements: 5
ChIP density(Case|Control): 89337.3635|6558.4295
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR5188 ;
ROSE Overlap DHX37 ; MIR5188 ; UBC ;
ROSE Proximal SCARB1 ; BRI3BP ;
ROSE Closest MIR5188 ;
Lasso ;
PreSTIGE ;
ABC NCOR2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164200051 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers