SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164101104
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr12:56517493-56530787
Size: 13294
Super-enhancer rank 1104
Number of SE elements: 2
ChIP density(Case|Control): 15141.866|1504.8808
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RBMS2 ;
ROSE Overlap RBMS2 ;
ROSE Proximal SPRYD4 ; GLS2 ;
ROSE Closest RBMS2 ;
Lasso ;
PreSTIGE ;
ABC RPL41 ; ZC3H10 ; ESYT1 ; MYL6B ; MYL6 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164101104 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers