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Super-enhancer overview

SE ID: SE_02_164101032
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr13:113819708-113861746
Size: 42038
Super-enhancer rank 1032
Number of SE elements: 13
ChIP density(Case|Control): 17374.3054|3127.6272
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GAS6 ;
ROSE Overlap GAS6-AS1 ; GAS6 ;
ROSE Proximal GAS6-AS2 ; LINC00452 ;
ROSE Closest GAS6 ;
Lasso ;
PreSTIGE ;
ABC TUBGCP3 ; LINC01070 ; GRTP1 ; ATP11A ; GRTP1-AS1 ; LAMP1 ; MCF2L-AS1 ; PCID2 ; CUL4A ; F10 ; MCF2L ; DCUN1D2 ; TMCO3 ; TFDP1 ; GAS6 ; GAS6-AS2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164101032 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers