SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164101031
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr1:1510728-1515022
Size: 4294
Super-enhancer rank 1031
Number of SE elements: 1
ChIP density(Case|Control): 14609.4762|352.108
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ATAD3A ;
ROSE Overlap ATAD3A ;
ROSE Proximal TMEM240 ; ATAD3B ;
ROSE Closest ATAD3A ;
Lasso ;
PreSTIGE ;
ABC SSU72 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164101031 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers