SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164101020
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr11:64315965-64319854
Size: 3889
Super-enhancer rank 1020
Number of SE elements: 1
ChIP density(Case|Control): 14814.3677|383.4554
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRMT112 ;
ROSE Overlap ESRRA ; PRDX5 ; TRMT112 ;
ROSE Proximal RPS6KA4 ; BAD ; GPR137 ; TEX40 ; CCDC88B ; ESRRA ; KCNK4 ; MIR1237 ; PRDX5 ; MIR7155 ;
ROSE Closest TRMT112 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164101020 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers