SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164101019
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr19:2233913-2239422
Size: 5509
Super-enhancer rank 1019
Number of SE elements: 1
ChIP density(Case|Control): 14945.3661|511.7861
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SF3A2 ;
ROSE Overlap PLEKHJ1 ; MIR1227 ; MIR6789 ; SF3A2 ;
ROSE Proximal C19orf35 ; AMH ; JSRP1 ; OAZ1 ; MIR4321 ;
ROSE Closest SF3A2 ;
Lasso ;
PreSTIGE ;
ABC PLEKHJ1 ; SF3A2 ; AMH ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164101019 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers