SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164101007
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr19:55403985-55409053
Size: 5068
Super-enhancer rank 1007
Number of SE elements: 1
ChIP density(Case|Control): 15114.2964|546.8372
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UBE2S ;
ROSE Overlap UBE2S ;
ROSE Proximal TMEM238 ; TMEM190 ; MIR6805 ; FAM71E2 ; IL11 ; RPL28 ; COX6B2 ; SHISA7 ;
ROSE Closest UBE2S ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164101007 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers