SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100990
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr7:149003784-149029559
Size: 25775
Super-enhancer rank 990
Number of SE elements: 9
ChIP density(Case|Control): 16833.6525|2095.5075
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PDIA4 ;
ROSE Overlap PDIA4 ;
ROSE Proximal RNY1 ; RNY3 ; RNY4 ; GHET1 ;
ROSE Closest PDIA4 ;
Lasso ;
PreSTIGE ;
ABC LOC155060 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100990 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers