SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100988
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr3:50333393-50341429
Size: 8036
Super-enhancer rank 988
Number of SE elements: 1
ChIP density(Case|Control): 15535.1952|794.7604
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RASSF1 ;
ROSE Overlap RASSF1 ; ZMYND10 ; RASSF1-AS1 ;
ROSE Proximal HYAL1 ; HYAL2 ; IFRD2 ; TMEM115 ; CYB561D2 ; RASSF1 ; NAT6 ; HYAL3 ; ZMYND10 ; TUSC2 ; NPRL2 ;
ROSE Closest RASSF1 ;
Lasso ;
PreSTIGE ;
ABC HYAL1 ; HYAL3 ; NAT6 ; IFRD2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100988 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers