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Super-enhancer overview

SE ID: SE_02_164100953
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr6:89787855-89820892
Size: 33037
Super-enhancer rank 953
Number of SE elements: 5
ChIP density(Case|Control): 18395.0016|3254.1445
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MDN1 ;
ROSE Overlap MDN1 ;
ROSE Proximal CASP8AP2 ;
ROSE Closest MDN1 ;
Lasso ;
PreSTIGE ;
ABC PNRC1 ; MAP3K7 ; UBE2J1 ; PM20D2 ; SRSF12 ; MDN1 ; LOC101929057 ; LYRM2 ; ANKRD6 ; RRAGD ; RNGTT ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100953 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers