SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100941
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr19:1586340-1593698
Size: 7358
Super-enhancer rank 941
Number of SE elements: 1
ChIP density(Case|Control): 15868.9986|632.788
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MBD3 ;
ROSE Overlap MBD3 ;
ROSE Proximal UQCR11 ; MBD3 ; MEX3D ;
ROSE Closest MBD3 ;
Lasso ;
PreSTIGE ;
ABC MBD3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100941 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers