SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164100902
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr6:10403207-10415499
Size: 12292
Super-enhancer rank 902
Number of SE elements: 3
ChIP density(Case|Control): 16858.478|1298.0352
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TFAP2A-AS1 ;
ROSE Overlap TFAP2A ; TFAP2A-AS1 ;
ROSE Proximal MIR5689 ; LINC00518 ;
ROSE Closest TFAP2A-AS1 ;
Lasso ;
PreSTIGE ;
ABC HIPSTR ; TFAP2A-AS1 ; TFAP2A ; MIR5689HG ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100902 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers