SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100889
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr11:62853172-62862589
Size: 9417
Super-enhancer rank 889
Number of SE elements: 1
ChIP density(Case|Control): 16536.252|903.0903
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC3A2 ;
ROSE Overlap SNORD26 ; SNORD30 ; SNORD28 ; SNORD27 ; SNHG1 ; SNORD31 ; SNORD25 ; SLC3A2 ; SNORD29 ;
ROSE Proximal RNU2-2P ; SLC3A2 ; NXF1 ; WDR74 ; SNORD22 ; STX5 ;
ROSE Closest SLC3A2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100889 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers