SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100882
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr19:3683165-3730554
Size: 47389
Super-enhancer rank 882
Number of SE elements: 11
ChIP density(Case|Control): 19628.5238|3928.5481
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TJP3 ;
ROSE Overlap PIP5K1C ; TJP3 ;
ROSE Proximal MRPL54 ; APBA3 ; RAX2 ; PIP5K1C ;
ROSE Closest TJP3 ;
Lasso ;
PreSTIGE ;
ABC PIP5K1C ; TJP3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100882 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers