SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100881
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr19:1100859-1107794
Size: 6935
Super-enhancer rank 881
Number of SE elements: 1
ChIP density(Case|Control): 16396.4205|685.178
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GPX4 ;
ROSE Overlap GPX4 ; SBNO2 ;
ROSE Proximal POLR2E ; HMHA1 ;
ROSE Closest GPX4 ;
Lasso ;
PreSTIGE ;
ABC POLR2E ; GPX4 ; STK11 ; SBNO2 ; TMEM259 ; ABCA7 ; ARHGAP45 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100881 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers