SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100880
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr11:18382720-18408850
Size: 26130
Super-enhancer rank 880
Number of SE elements: 7
ChIP density(Case|Control): 18076.734|2364.765
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LDHA ;
ROSE Overlap LDHA ; MIR3159 ;
ROSE Proximal LDHA ; LDHAL6A ; LDHC ;
ROSE Closest LDHA ;
Lasso ;
PreSTIGE ;
ABC KCNJ11 ; NUCB2 ; USH1C ; SPTY2D1 ; TMEM86A ; ZDHHC13 ; E2F8 ; OTOG ; SERGEF ; NAV2 ; SPTY2D1-AS1 ; UEVLD ; TSG101 ; SAAL1 ; SAA3P ; LDHA ; GTF2H1 ; SAA4 ; HPS5 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100880 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers