SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100879
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr8:144407282-144415129
Size: 7847
Super-enhancer rank 879
Number of SE elements: 1
ChIP density(Case|Control): 16756.4838|1043.651
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CPSF1 ;
ROSE Overlap SLC39A4 ; CPSF1 ;
ROSE Proximal FBXL6 ; MIR6893 ; VPS28 ; TONSL-AS1 ; SLC52A2 ; MIR939 ; MIR6849 ; CYHR1 ; TONSL ; ADCK5 ; MIR1234 ;
ROSE Closest CPSF1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100879 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers