SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100874
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr17:29146914-29159767
Size: 12853
Super-enhancer rank 874
Number of SE elements: 2
ChIP density(Case|Control): 17081.637|1305.8648
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MYO18A ;
ROSE Overlap MYO18A ;
ROSE Proximal MYO18A ;
ROSE Closest MYO18A ;
Lasso ;
PreSTIGE ;
ABC CRLF3 ; ATAD5 ; TEFM ; ADAP2 ; RNF135 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100874 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers