SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164100863
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr19:35715638-35741254
Size: 25616
Super-enhancer rank 863
Number of SE elements: 6
ChIP density(Case|Control): 17797.9968|1882.776
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KMT2B ;
ROSE Overlap KMT2B ; IGFLR1 ; ZBTB32 ;
ROSE Proximal PSENEN ; U2AF1L4 ; UPK1A ; HSPB6 ; LIN37 ; ARHGAP33 ; UPK1A-AS1 ; PROSER3 ;
ROSE Closest KMT2B ;
Lasso ;
PreSTIGE ;
ABC LSR ; USF2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100863 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers