SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100855
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr17:78860183-78886609
Size: 26426
Super-enhancer rank 855
Number of SE elements: 7
ChIP density(Case|Control): 19349.1172|3358.7446
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CEP295NL ;
ROSE Overlap TIMP2 ;
ROSE Proximal CEP295NL ; USP36 ;
ROSE Closest CEP295NL ;
Lasso ;
PreSTIGE ;
ABC EIF4A3 ; NDUFAF8 ; TEPSIN ; LOC105371925 ; CCDC40 ; LINC01979 ; LINC01978 ; SGSH ; SLC26A11 ; RNF213 ; ENDOV ; LOC100294362 ; RPTOR ; LOC101928855 ; CHMP6 ; BAIAP2-AS1 ; CEP131 ; AATK ; BAIAP2 ; GAA ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100855 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers