SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100824
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr1:44774420-44778449
Size: 4029
Super-enhancer rank 824
Number of SE elements: 1
ChIP density(Case|Control): 16881.9129|488.7177
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORD46 ;
ROSE Overlap SNORD46 ; RPS8 ; SNORD55 ; SNORD38A ; SNORD38B ;
ROSE Proximal RNU5D-1 ; KIF2C ; BTBD19 ; PLK3 ; BEST4 ; TCTEX1D4 ;
ROSE Closest SNORD46 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100824 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers