SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100822
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr17:17814152-17829048
Size: 14896
Super-enhancer rank 822
Number of SE elements: 1
ChIP density(Case|Control): 17563.8736|1146.992
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR33B ;
ROSE Overlap SREBF1 ;
ROSE Proximal SMCR5 ; RAI1-AS1 ; MIR6777 ; MIR33B ;
ROSE Closest MIR33B ;
Lasso ;
PreSTIGE ;
ABC DRG2 ; DRC3 ; TOM1L2 ; SMCR5 ; RAI1 ; SMCR2 ; ATPAF2 ; GID4 ; RASD1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100822 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers