SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100773
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr5:139560201-139606230
Size: 46029
Super-enhancer rank 773
Number of SE elements: 12
ChIP density(Case|Control): 21730.2909|4653.5319
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UBE2D2 ;
ROSE Overlap UBE2D2 ;
ROSE Proximal UBE2D2 ; CXXC5 ;
ROSE Closest UBE2D2 ;
Lasso ;
PreSTIGE ;
ABC SLC4A9 ; HBEGF ; PFDN1 ; NRG2 ; CYSTM1 ; LOC101929719 ; PURA ; LINC01024 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100773 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers