SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100750
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr2:85537547-85553590
Size: 16043
Super-enhancer rank 750
Number of SE elements: 6
ChIP density(Case|Control): 19237.1613|1921.9514
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAT2A ;
ROSE Overlap PARTICL ; MAT2A ; GGCX ;
ROSE Proximal VAMP8 ; GGCX ; RNF181 ; VAMP5 ; USP39 ; TMEM150A ;
ROSE Closest MAT2A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100750 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers