SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100718
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr1:19217001-19260494
Size: 43493
Super-enhancer rank 718
Number of SE elements: 10
ChIP density(Case|Control): 21620.3703|3866.5277
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EMC1 ;
ROSE Overlap MRTO4 ; EMC1 ;
ROSE Proximal AKR7A3 ; EMC1 ; LOC100506730 ; AKR7L ; UBR4 ;
ROSE Closest EMC1 ;
Lasso ;
PreSTIGE ;
ABC ALDH4A1 ; AKR7A2 ; MRTO4 ; EMC1 ; LOC101927895 ; UBR4 ; IFFO2 ; PQLC2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100718 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers