SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164100708
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr19:56104587-56122245
Size: 17658
Super-enhancer rank 708
Number of SE elements: 7
ChIP density(Case|Control): 19176.588|1253.718
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZNF787 ;
ROSE Overlap ZNF787 ;
ROSE Proximal ZNF444 ; LOC101928886 ;
ROSE Closest ZNF787 ;
Lasso ;
PreSTIGE ;
ABC FIZ1 ; ZNF524 ; CCDC106 ; U2AF2 ; ZNF628 ; NAT14 ; SSC5D ; SBK3 ; ZNF579 ; ZNF784 ; ZNF580 ; ZNF581 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100708 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers