SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164100674
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr7:5549190-5571815
Size: 22625
Super-enhancer rank 674
Number of SE elements: 4
ChIP density(Case|Control): 20362.5|1952.5375
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ACTB ;
ROSE Overlap ;
ROSE Proximal FSCN1 ; FBXL18 ; LOC221946 ; ACTB ;
ROSE Closest ACTB ;
Lasso ;
PreSTIGE ;
ABC FBXL18 ; LOC221946 ; FSCN1 ; ACTB ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100674 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers