SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164100673
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr1:1782849-1884532
Size: 101683
Super-enhancer rank 673
Number of SE elements: 29
ChIP density(Case|Control): 27474.7466|9049.787
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NADK ;
ROSE Overlap GNB1 ;
ROSE Proximal NADK ; CALML6 ; GNB1 ; TMEM52 ; SLC35E2 ;
ROSE Closest NADK ;
Lasso ;
PreSTIGE ;
ABC GNB1 ; CALML6 ; TMEM52 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100673 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers