SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100671
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr2:130154297-130187678
Size: 33381
Super-enhancer rank 671
Number of SE elements: 12
ChIP density(Case|Control): 21143.5254|2650.4514
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SMPD4 ;
ROSE Overlap SMPD4 ; MZT2B ;
ROSE Proximal CCDC74B ; MED15P9 ; POTEF ; SMPD4 ; TUBA3E ;
ROSE Closest SMPD4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100671 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers