SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100650
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr2:85609705-85647228
Size: 37523
Super-enhancer rank 650
Number of SE elements: 13
ChIP density(Case|Control): 22116.0562|3302.024
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: USP39 ;
ROSE Overlap USP39 ; C2orf68 ;
ROSE Proximal RNF181 ; VAMP8 ; USP39 ; GGCX ; VAMP5 ; TMEM150A ; GNLY ; SFTPB ;
ROSE Closest USP39 ;
Lasso ;
PreSTIGE ;
ABC CAPG ; SH2D6 ; GGCX ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100650 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers