SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100638
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr3:186782451-186787500
Size: 5049
Super-enhancer rank 638
Number of SE elements: 1
ChIP density(Case|Control): 19574.973|591.7428
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORD2 ;
ROSE Overlap MIR1248 ; EIF4A2 ; SNORA63 ; SNORD2 ; SNORA81 ;
ROSE Proximal LOC102724699 ; RFC4 ; SNORA4 ;
ROSE Closest SNORD2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100638 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers