SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100635
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr17:42997527-43014764
Size: 17237
Super-enhancer rank 635
Number of SE elements: 4
ChIP density(Case|Control): 20663.7156|1642.6861
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IFI35 ;
ROSE Overlap RPL27 ; VAT1 ; IFI35 ;
ROSE Proximal PTGES3L ; AARSD1 ; PTGES3L-AARSD1 ; RUNDC1 ; RND2 ;
ROSE Closest IFI35 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100635 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers