SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100623
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chrX:154388428-154401107
Size: 12679
Super-enhancer rank 623
Number of SE elements: 3
ChIP density(Case|Control): 19681.6117|568.0192
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RPL10 ;
ROSE Overlap RPL10 ; SNORA70 ;
ROSE Proximal RPL10 ; EMD ; FLNA ; ATP6AP1 ; MIR6858 ; DNASE1L1 ; GDI1 ; TAZ ; FAM50A ; CH17-340M24.3 ;
ROSE Closest RPL10 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100623 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers