SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100565
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr19:53864709-53890077
Size: 25368
Super-enhancer rank 565
Number of SE elements: 3
ChIP density(Case|Control): 22260.42|2146.1328
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRKCG ;
ROSE Overlap MYADM ; PRKCG ;
ROSE Proximal CACNG7 ; NLRP12 ;
ROSE Closest PRKCG ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100565 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers