SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100548
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr17:7248317-7254812
Size: 6495
Super-enhancer rank 548
Number of SE elements: 1
ChIP density(Case|Control): 21100.3065|541.683
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CTDNEP1 ;
ROSE Overlap ELP5 ; CTDNEP1 ;
ROSE Proximal DVL2 ; CLDN7 ; DLG4 ; MIR324 ; ACADVL ; SLC2A4 ; PHF23 ; GABARAP ; YBX2 ;
ROSE Closest CTDNEP1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100548 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers