SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100536
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr17:48609344-48618522
Size: 9178
Super-enhancer rank 536
Number of SE elements: 1
ChIP density(Case|Control): 22169.459|1276.6598
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXB8 ;
ROSE Overlap HOXB8 ; HOXB7 ;
ROSE Proximal HOXB3 ; HOXB-AS3 ; HOXB9 ; MIR10A ; HOXB6 ; HOXB4 ; HOXB5 ; MIR196A1 ;
ROSE Closest HOXB8 ;
Lasso ;
PreSTIGE ;
ABC EPN3 ; SPATA20 ; LOC105371824 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100536 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers