SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164100535
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr11:93737305-93742743
Size: 5438
Super-enhancer rank 535
Number of SE elements: 1
ChIP density(Case|Control): 21582.3344|680.2938
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TAF1D ;
ROSE Overlap TAF1D ; C11orf54 ;
ROSE Proximal SNORA8 ; SNORD5 ; SNORD6 ; SNORA25 ; SCARNA9 ; MIR1304 ; C11orf54 ; SNORA32 ; SNORA40 ; SNORA18 ; MED17 ; SNORA1 ;
ROSE Closest TAF1D ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100535 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers