SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100466
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr1:1342132-1350017
Size: 7885
Super-enhancer rank 466
Number of SE elements: 1
ChIP density(Case|Control): 23144.8405|694.6685
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DVL1 ;
ROSE Overlap DVL1 ;
ROSE Proximal AURKAIP1 ; MXRA8 ; PUSL1 ; TAS1R3 ; MIR6727 ; ACAP3 ; LOC148413 ; CPTP ; CCNL2 ; MIR6808 ; MIR6726 ; CPSF3L ;
ROSE Closest DVL1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100466 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers