SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100462
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr17:58354472-58428817
Size: 74345
Super-enhancer rank 462
Number of SE elements: 17
ChIP density(Case|Control): 34823.198|12259.4905
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNF43 ;
ROSE Overlap RNF43 ; HSF5 ;
ROSE Proximal BZRAP1-AS1 ; MIR4736 ; MIR142 ; BZRAP1 ; SUPT4H1 ;
ROSE Closest RNF43 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100462 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers