SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100461
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr17:7570567-7580573
Size: 10006
Super-enhancer rank 461
Number of SE elements: 1
ChIP density(Case|Control): 23783.2614|1216.7296
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORA48 ;
ROSE Overlap SENP3-EIF4A1 ; SENP3 ; SNORA67 ; SNORD10 ; SNORA48 ; CD68 ; EIF4A1 ;
ROSE Proximal SHBG ; TNFSF13 ; SAT2 ; TNFSF12-TNFSF13 ; SOX15 ; MPDU1 ; FXR2 ;
ROSE Closest SNORA48 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100461 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers