SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100419
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr7:99379243-99425520
Size: 46277
Super-enhancer rank 419
Number of SE elements: 17
ChIP density(Case|Control): 26910.0755|3405.9872
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PDAP1 ;
ROSE Overlap PTCD1 ; ATP5J2-PTCD1 ; ARPC1B ; PDAP1 ; BUD31 ;
ROSE Proximal ZNF789 ; ATP5J2 ; CPSF4 ;
ROSE Closest PDAP1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100419 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers