SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100410
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr6:41916960-41938430
Size: 21470
Super-enhancer rank 410
Number of SE elements: 9
ChIP density(Case|Control): 25824.116|1930.153
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BYSL ;
ROSE Overlap BYSL ; CCND3 ; MED20 ;
ROSE Proximal USP49 ; MED20 ;
ROSE Closest BYSL ;
Lasso ;
PreSTIGE ;
ABC MED20 ; BYSL ; CCND3 ; TAF8 ; USP49 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100410 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers